• China embraces a revolution in genetic testing, seeking answers on destiny and identity
    https://www.statnews.com/2018/09/27/china-embraces-consumer-genetic-testing

    BEIJING — It was from the news of American actress Angelina Jolie’s double mastectomy that Yang Yang learned it would be possible to have her DNA sequenced. A white-collar worker from Chongqing, a major city in southwest China, Yang admired her idol’s decision in 2013 to take her future into her own hands after a genetic test revealed a high risk of breast cancer. Five years later, Yang has discovered that genetic testing services are not only available to Hollywood stars, but also to the (...)

    #23Mofang #biométrie #génétique

  • With stem cells and #CRISPR, scientists breed mice with same-sex parents
    https://www.statnews.com/2018/10/11/mice-same-sex-parents-stem-cells-crispr

    Mammals still need both sets, though, to have their full suite of genetic instructions. IGF2, for example, is a gene crucial for growth and development, but only the paternal copy is normally active. If we just inherited DNA maternally then, we wouldn’t grow or develop properly; that gene would simply remain off. On the flip side, there are a number of these genes for which we rely on our mothers.

    But scientists started challenging nature’s way a decade and a half ago. The trick was to cajole certain maternal genes to act like paternal genes in terms of their activity, or vice versa.

    #manipulations_génétiques

  • New studies show how easy it is to identify people using genetic databases - STAT
    https://www.statnews.com/2018/10/11/genetic-databases-privacy

    n recent months, consumer genealogy websites have unleashed a revolution in forensics, allowing law enforcement to use family trees to track down the notorious Golden State Killer in California and solve other cold cases across the country. But while the technique has put alleged killers behind bars, it has also raised questions about the implications for genetic privacy.

    According to a pair of studies published Thursday, your genetic privacy may have already eroded even further than previously realized.

    In an analysis published in the journal Science, researchers used a database run by the genealogy company MyHeritage to look at the genetic information of nearly 1.3 million anonymized people who’ve had their DNA analyzed by a direct-to-consumer genomics company. For nearly 60 percent of those people, it was possible to track down someone whose DNA was similar enough to indicate they were third cousins or closer in relation; for another 15 percent of the samples, second cousins or closer could be found.

    Yaniv Erlich, the lead author on the Science paper, said his team’s findings should prompt regulators and others to reconsider the assumption that genetic information is de-identified. “It’s really not the case. At least technically, it seems feasible to identify some significant part of the population” with such investigations, said Erlich, who’s a computer scientist at Columbia University and chief science officer at MyHeritage.

    The Science paper counted 12 cold cases that were solved between April and August of this year when law enforcement turned to building family trees based on genetic data; a 13th case was an active investigation.

    The most famous criminal identified this way: the Golden State Killer, who terrorized California with a series of rapes and murders in the 1970s and 1980s. With the help of a genetic genealogist, investigators uploaded a DNA sample collected from an old crime scene to a public genealogy database, built family trees, and tracked down relatives. They winnowed down their list of potential suspects to one man with blue eyes, and in April, they made the landmark arrest.

    To crack that case, the California investigators used GEDmatch, an online database that allows people who got their DNA analyzed by companies like 23andMe and Ancestry to upload their raw genetic data so that they can track down distant relatives. MyHeritage’s database — which contains data from 1.75 million people, mostly Americans who’ve gotten their DNA analyzed by MyHeritage’s genetic testing business — works similarly, although it explicitly prohibits forensic searches. (23andMe warns users about the privacy risks of uploading their genetic data to such third party sites.)

    “For me, these articles are fascinating and important and we shouldn’t shy away from the privacy concerns that these articles raise. But at the same time, we should keep in mind the personal and societal value that we believe that we are accruing as we make these large collections,” said Green, who was not involved in the new studies and is an adviser for genomics companies including Helix and Veritas Genetics.

    He pointed to the potential of genomics not only to reunite family members and put criminals behind bars, but also to predict and prevent heritable diseases and develop new drugs.

    As with using social media and paying with credit cards online, reaping the benefits of genetic testing requires accepting a certain level of privacy risk, Green said. “We make these tradeoffs knowing that we’re trading some vulnerability for the advantages,” he said.

    #Génomique #ADN #Vie_privée

  • Russian bots were used to sow divisions on vaccines, researchers say - STAT
    https://www.statnews.com/2018/08/23/vaccines-russian-bots

    An analysis of Twitter accounts previously identified as having been operated by Russian bots and trolls found they dove into the vaccine debate as early as January 2015, the researchers reported. They did not take one side or the other, but seemed to tweet pro-vaccine and anti-vaccine messages in roughly equal measure.

    (…) “The more the vaccine ‘debate’… is amplified it gains an undeserved sense of legitimacy and gives vaccine-hesitant individuals a pretense to forgo vaccination for themselves and their children,” said Adalja, who was harshly critical of the use of vaccinations in efforts to turn people against each other, calling it “overtly nihilistic.”

    #nihilisme #santé #vaccins #twitter #bots (russes évidemment)

    • Le résumé de l’étude (texte complet derrière #paywall)

      Weaponized Health Communication: Twitter Bots and Russian Trolls Amplify the Vaccine Debate | AJPH | Ahead of Print
      https://ajph.aphapublications.org/doi/10.2105/AJPH.2018.304567

      Abstract

      Objectives. To understand how Twitter bots and trolls (“bots”) promote online health content.

      Methods. We compared bots’ to average users’ rates of vaccine-relevant messages, which we collected online from July 2014 through September 2017. We estimated the likelihood that users were bots, comparing proportions of polarized and antivaccine tweets across user types. We conducted a content analysis of a Twitter hashtag associated with Russian troll activity.

      Results. Compared with average users, Russian trolls (χ2(1) = 102.0; P < .001), sophisticated bots (χ2(1) = 28.6; P < .001), and “content polluters” (χ2(1) = 7.0; P < .001) tweeted about vaccination at higher rates. Whereas content polluters posted more antivaccine content (χ2(1) = 11.18; P < .001), Russian trolls amplified both sides. Unidentifiable accounts were more polarized (χ2(1) = 12.1; P < .001) and antivaccine (χ2(1) = 35.9; P < .001). Analysis of the Russian troll hashtag showed that its messages were more political and divisive.

      Conclusions. Whereas bots that spread malware and unsolicited content disseminated antivaccine messages, Russian trolls promoted discord. Accounts masquerading as legitimate users create false equivalency, eroding public consensus on vaccination.

      Public Health Implications. Directly confronting vaccine skeptics enables bots to legitimize the vaccine debate. More research is needed to determine how best to combat bot-driven content.

      a Twitter hashtag associated with Russian troll activity
      mais encore ?

    • aucun #DOI ne résiste à sci-hub :)

      This analysis is supplemented by a qualitative study of #VaccinateUS — a Twitter hashtag designed to promote discord using vaccination as a political wedge issue. #VaccinateUS tweets were uniquely identified with Russian troll accounts linked to the Internet Research Agency—a company backed by the Russian government specializing in online influence operations. 20

      [20]. Popken B. Twitter deleted Russian troll tweets. So we published more than 200,000 of them. Available at:
      https://www.nbcnews.com/tech/social-media/nowavailable-more-200-000-deleted-russian-troll-tweetsn844731.

  • As towns lose their newspapers, disease detectives are left to fly blind
    https://www.statnews.com/2018/03/20/news-deserts-infectious-disease

    Epidemiologists rely on all kinds of data to detect the spread of disease, including reports from local and state agencies and social media. But local newspapers are critical to identifying outbreaks and forecasting their trajectories.

    On the map, Majumder saw every county without a local newspaper as a community where health officials and disease researchers could be flying blind.

    “We rely very heavily on local news. And I think what this will probably mean is that there are going to be pockets of the U.S. where we’re just not going to have a particularly good signal anymore,” said Majumder, a Ph.D. candidate at the Massachusetts Institute of Technology.

    Majumder is a computational epidemiology research fellow at HealthMap, a 12-year-old disease detection project run by researchers from Boston Children’s Hospital. The website uses nontraditional data sources — reports from local news outlets and social media platforms among them— to track global infectious disease activity in real time.